HBV Target gene Detail Information

> SNCAIP Gene Search Result

Gene Information

Gene Name	SNCAIP
Gene ID	9627
Gene Full Name	synuclein alpha interacting protein
Gene Alias	Sph1; SYPH1
Transcripts	ENSG00000064692
Virus	HBV
Gene Type	protein coding
HPA Location Info	Cytoplasmic bodies;Nucleoplasm;
HPA Protein Class Info	Disease related genes, Predicted intracellular proteins
Uniport_ID	Q9Y6H5
HGNC ID	HGNC:11139
VEGA ID	OTTHUMG00000128915
OMIM ID	603779
String ID	9606.ENSP00000261368
PharmGKB ID	PA35987

Target gene [SNCAIP] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
1004233	chr5	73	11	4	88	View
1007386	chr5	10	15	3	28	View
1015680	chr5	1	1		2	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
LIHC (TCGA)	Liver hepatocellular carcinoma	424	Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC
HeatMap of cell type fractions in all samples	Lollipop of SNCAIP expression and immune infiltrating cell level correlation result in HBV+ samples
SNCAIP expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).