HTLV1 Target gene Detail Information

> SMURF2 Gene Search Result


Gene Information
Gene Name SMURF2
Gene ID 64750
Gene Full Name SMAD specific E3 ubiquitin protein ligase 2
Transcripts ENSG00000108854
Virus HTLV1
Gene Type protein coding
HPA Location Info Nuclear speckles;
HPA Protein Class Info Enzymes, Predicted intracellular proteins
Uniport_ID Q9HAU4
HGNC ID HGNC:16809
VEGA ID OTTHUMG00000179189
OMIM ID 605532
String ID 9606.ENSP00000262435
PharmGKB ID PA134985524
Target gene [SMURF2] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6000520 chr17 1297 27 11 1335 View
6002259 chr17 82 61 120 263 View

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).