HIV Target gene Detail Information

> SMURF2 Gene Search Result


Gene Information
Gene Name SMURF2
Gene ID 64750
Gene Full Name SMAD specific E3 ubiquitin protein ligase 2
Transcripts ENSG00000108854
Virus HIV
Gene Type protein coding
HPA Location Info Nuclear speckles;
HPA Protein Class Info Enzymes, Predicted intracellular proteins
Uniport_ID Q9HAU4
HGNC ID HGNC:16809
VEGA ID OTTHUMG00000179189
OMIM ID 605532
String ID 9606.ENSP00000262435
PharmGKB ID PA134985524
Target gene [SMURF2] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
4001497 chr17 118 34 5 157 View
4002613 chr17 67 12 8 87 View
4003201 chr17 26 3 38 67 View
4004119 chr17 48 1 49 View
4004235 chr17 5 38 4 47 View
4006048 chr17 4 6 17 27 View
4009455 chr17 9 2 11 View
4010204 chr17 9 9 View
4010301 chr17 6 3 9 View
4012920 chr17 4 4 View
4013251 chr17 3 1 4 View

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).