HTLV1 Target gene Detail Information

> SMTNL2 Gene Search Result


Gene Information
Gene Name SMTNL2
Gene ID 342527
Gene Full Name smoothelin like 2
Transcripts ENSG00000188176
Virus HTLV1
Gene Type protein coding
HPA Location Info
HPA Protein Class Info Predicted intracellular proteins
Uniport_ID Q2TAL5
HGNC ID HGNC:24764
VEGA ID OTTHUMG00000132938
String ID 9606.ENSP00000373964
PharmGKB ID PA145007828
Target gene [SMTNL2] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6015688 chr17 11 2 13 View

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).