HTLV1 Target gene Detail Information

> SMPD3 Gene Search Result


Gene Information
Gene Name SMPD3
Gene ID 55512
Gene Full Name sphingomyelin phosphodiesterase 3
Gene Alias NSMASE2
Transcripts ENSG00000103056
Virus HTLV1
Gene Type protein coding
HPA Location Info Endoplasmic reticulum;
Membrane Info Predicted membrane proteins
HPA Protein Class Info Enzymes, Predicted intracellular proteins, Predicted membrane proteins
Uniport_ID Q9NY59
HGNC ID HGNC:14240
VEGA ID OTTHUMG00000137559
OMIM ID 605777
String ID 9606.ENSP00000219334
Drugbank ID BE0002301
PharmGKB ID PA37862
Target gene [SMPD3] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6010060 chr16 22 10 1 33 View
6014603 chr16 13 3 16 View
6019109 chr16 8 8 View

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).