HTLV1 Target gene Detail Information

> SMPD2 Gene Search Result


Gene Information
Gene Name SMPD2
Gene ID 6610
Gene Full Name sphingomyelin phosphodiesterase 2
Gene Alias ISC1; NSMASE; NSMASE1
Transcripts ENSG00000135587
Virus HTLV1
Gene Type protein coding
HPA Location Info Plasma membrane;Vesicles;Cell Junctions;
Membrane Info Predicted membrane proteins
HPA Protein Class Info Enzymes, Predicted intracellular proteins, Predicted membrane proteins
Uniport_ID O60906
HGNC ID HGNC:11121
VEGA ID OTTHUMG00000015348
OMIM ID 603498
String ID 9606.ENSP00000258052
PharmGKB ID PA35970
Target gene [SMPD2] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6004742 chr6 103 2 105 View

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).