HPV Target gene Detail Information

> SMLR1 Gene Search Result

Gene Information

Gene Name	SMLR1
Gene ID	100507203
Gene Full Name	small leucine rich protein 1
Transcripts	ENSG00000256162
Virus	HPV
Gene Type	protein coding
HPA Location Info
Membrane Info	Predicted membrane proteins
HPA Protein Class Info	Predicted membrane proteins
Uniport_ID	H3BR10
HGNC ID	HGNC:44670
VEGA ID	OTTHUMG00000176259
String ID	9606.ENSP00000456026
PharmGKB ID	PA166049154

Target gene [SMLR1] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
5403744	chr6	30	4	2	36	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
GSE140662 (GEO)	Condyloma Acuminatum	8	Condyloma acuminata (HPV+)(5), Skin(3)

> Dataset: GSE140662
HeatMap of cell type fractions in all samples	Lollipop of SMLR1 expression and immune infiltrating cell level correlation result in HPV+ samples
SMLR1 expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).