HIV Target gene Detail Information

> SMIM7 Gene Search Result

Gene Information

Gene Name	SMIM7
Gene ID	79086
Gene Full Name	small integral membrane protein 7
Gene Alias	C19orf42
Transcripts	ENSG00000214046
Virus	HIV
Gene Type	protein coding
HPA Location Info	Golgi apparatus;
Membrane Info	Predicted membrane proteins
HPA Protein Class Info	Predicted intracellular proteins, Predicted membrane proteins
Uniport_ID	Q9BQ49
HGNC ID	HGNC:28419
VEGA ID	OTTHUMG00000149895
String ID	9606.ENSP00000351569
PharmGKB ID	PA144596475

Target gene [SMIM7] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
4009459	chr19	11			11	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
GSE17372 (GEO)	AIDS-associated lymphoma	17	AIDS-Related Lymphomas (HIV+)(17)

> Dataset: GSE17372
HeatMap of cell type fractions in all samples	Lollipop of SMIM7 expression and immune infiltrating cell level correlation result in HIV+ samples
SMIM7 expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).