HPV Target gene Detail Information

> SMIM30 Gene Search Result


Gene Information
Gene Name SMIM30
Gene ID 401397
Gene Full Name small integral membrane protein 30
Gene Alias LINC00998
Transcripts ENSG00000214194
Virus HPV
Gene Type protein coding
HPA Location Info
Membrane Info Predicted membrane proteins
HPA Protein Class Info Predicted membrane proteins
Uniport_ID A4D0T7
HGNC ID HGNC:48953
PharmGKB ID PA166181643
Target gene [SMIM30] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
5200435 chr7 1 1 2 View
5404755 chr7 0 View

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).