HPV Target gene Detail Information

> SMIM21 Gene Search Result

Gene Information

Gene Name	SMIM21
Gene ID	284274
Gene Full Name	small integral membrane protein 21
Gene Alias	C18orf62
Transcripts	ENSG00000206026
Virus	HPV
Gene Type	protein coding
HPA Location Info
Membrane Info	Predicted membrane proteins
HPA Protein Class Info	Predicted intracellular proteins, Predicted membrane proteins
Uniport_ID	Q3B7S5
HGNC ID	HGNC:27598
VEGA ID	OTTHUMG00000179126
String ID	9606.ENSP00000462106
PharmGKB ID	PA162378613

Target gene [SMIM21] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
5201805	chr18	28			28	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
GSE140662 (GEO)	Condyloma Acuminatum	8	Condyloma acuminata (HPV+)(5), Skin(3)

> Dataset: GSE140662
HeatMap of cell type fractions in all samples	Lollipop of SMIM21 expression and immune infiltrating cell level correlation result in HPV+ samples
SMIM21 expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).