XMRV Target gene Detail Information

> SMIM20 Gene Search Result


Gene Information
Gene Name SMIM20
Gene ID 389203
Gene Full Name small integral membrane protein 20
Gene Alias PNX; C4orf52; MITRAC7
Transcripts ENSG00000250317
Virus XMRV
Gene Type protein coding
HPA Location Info Cytosol;Nucleoplasm;Nucleoli;
Membrane Info Predicted membrane proteins
HPA Protein Class Info Predicted membrane proteins
Uniport_ID Q8N5G0
HGNC ID HGNC:37260
VEGA ID OTTHUMG00000160330
OMIM ID 617465
String ID 9606.ENSP00000427407
PharmGKB ID PA165663312
Target gene [SMIM20] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
8100002 chr4 4408 3922 1625 9955 View

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).