HPV Target gene Detail Information

> SMG1 Gene Search Result

Gene Information

Gene Name	SMG1
Gene ID	23049
Gene Full Name	SMG1, nonsense mediated mRNA decay associated PI3K related kinase
Gene Alias	ATX; LIP; 61E3.4
Transcripts	ENSG00000157106
Virus	HPV
Gene Type	protein coding
HPA Location Info	Nucleoplasm;
HPA Protein Class Info	Enzymes, Predicted intracellular proteins
Uniport_ID	Q96Q15
HGNC ID	HGNC:30045
VEGA ID	OTTHUMG00000166900
OMIM ID	607032
String ID	9606.ENSP00000402515
PharmGKB ID	PA164725852

Target gene [SMG1] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
5403719	chr21	118	7		125	View
5404052	chr21	2	6		8	View
5404069	chr16	15	2		17	View
5404251	chr21	113	147	315	575	View

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).