HPV Target gene Detail Information

> SMCO2 Gene Search Result

Gene Information

Gene Name	SMCO2
Gene ID	341346
Gene Full Name	single-pass membrane protein with coiled-coil domains 2
Gene Alias	C12orf70
Transcripts	ENSG00000165935
Virus	HPV
Gene Type	protein coding
HPA Location Info
Membrane Info	Predicted membrane proteins
HPA Protein Class Info	Predicted membrane proteins
Uniport_ID	A6NFE2
HGNC ID	HGNC:34448
VEGA ID	OTTHUMG00000169205
String ID	9606.ENSP00000387617
PharmGKB ID	PA162378014

Target gene [SMCO2] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
5201629	chr12				0	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
GSE140662 (GEO)	Condyloma Acuminatum	8	Condyloma acuminata (HPV+)(5), Skin(3)

> Dataset: GSE140662
HeatMap of cell type fractions in all samples	Lollipop of SMCO2 expression and immune infiltrating cell level correlation result in HPV+ samples
SMCO2 expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).