HPV Target gene Detail Information

> SMCO1 Gene Search Result

Gene Information

Gene Name	SMCO1
Gene ID	255798
Gene Full Name	single-pass membrane protein with coiled-coil domains 1
Gene Alias	C3orf43
Transcripts	ENSG00000214097
Virus	HPV
Gene Type	protein coding
HPA Location Info
HPA Protein Class Info	Predicted intracellular proteins
Uniport_ID	Q147U7
HGNC ID	HGNC:27407
VEGA ID	OTTHUMG00000155581
String ID	9606.ENSP00000380671
PharmGKB ID	PA142672378

Target gene [SMCO1] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
5300496	chr3	30	21		51	View
5300497	chr3	48	4	3	55	View

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).