HIV Target gene Detail Information

> SMC6 Gene Search Result


Gene Information
Gene Name SMC6
Gene ID 79677
Gene Alias SMC-6; hSMC6; SMC6L1
Transcripts ENSG00000163029
Virus HIV
Gene Type protein coding
HPA Location Info Nucleoplasm;
HPA Protein Class Info Predicted intracellular proteins
Uniport_ID Q96SB8
HGNC ID HGNC:20466
VEGA ID OTTHUMG00000090675
OMIM ID 609387
String ID 9606.ENSP00000404092
PharmGKB ID PA134892702
Target gene [SMC6] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
4016092 chr2 0 View

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).