HIV Target gene Detail Information

> SMC4 Gene Search Result


Gene Information
Gene Name SMC4
Gene ID 10051
Gene Full Name structural maintenance of chromosomes 4
Gene Alias CAPC; CAP-C; SMC-4; SMC4L1
Transcripts ENSG00000113810
Virus HIV
Gene Type protein coding
HPA Location Info Cytosol;Nuclear speckles;
HPA Protein Class Info Plasma proteins, Predicted intracellular proteins
Uniport_ID Q9NTJ3
HGNC ID HGNC:14013
VEGA ID OTTHUMG00000159006
OMIM ID 605575
String ID 9606.ENSP00000349961
PharmGKB ID PA37834
Target gene [SMC4] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
4006088 chr3 2 25 27 View

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).