HIV Target gene Detail Information

> SMARCE1 Gene Search Result


Gene Information
Gene Name SMARCE1
Gene ID 6605
Gene Full Name SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1
Gene Alias CSS5; BAF57
Transcripts ENSG00000073584
Virus HIV
Gene Type protein coding
HPA Location Info Nucleoplasm;
HPA Protein Class Info Cancer-related genes, Disease related genes, Plasma proteins, Predicted intracellular proteins, Transcription factors
Uniport_ID Q969G3
HGNC ID HGNC:11109
VEGA ID OTTHUMG00000133367
OMIM ID 603111
String ID 9606.ENSP00000323967
Drugbank ID BE0008960
PharmGKB ID PA35959
Target gene [SMARCE1] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
4005383 chr17 32 1 33 View
4006609 chr17 19 5 24 View
4007557 chr17 14 1 4 19 View
4008232 chr17 16 16 View
4009075 chr17 12 1 13 View
4009143 chr17 8 4 12 View
4009379 chr17 12 12 View

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).