|
Gene Information
|
Gene Name
|
SMARCD3 |
|
Gene ID
|
6604
|
|
Gene Full Name
|
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3 |
|
Gene Alias
|
Rsc6p; BAF60C; CRACD3 |
|
Transcripts
|
ENSG00000082014
|
|
Virus
|
HTLV1 |
|
Gene Type
|
protein coding |
|
HPA Location Info
|
Nucleoplasm; 
|
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HPA Protein Class Info
|
Predicted intracellular proteins |
|
Uniport_ID
|
Q6STE5
|
|
HGNC ID
|
HGNC:11108
|
|
VEGA ID
|
OTTHUMG00000157431
|
|
OMIM ID
|
601737 |
|
String ID
|
9606.ENSP00000262188
|
|
PharmGKB ID
|
PA35958
|
Target gene [SMARCD3] related to VISs 
| DVID |
Chromosome |
HM |
TFBS |
CA |
Sum of Overlapped Records |
Detail |
| 6014856 |
chr7 |
12 |
3 |
|
15 |
View |
Relationship between gene expression and immune infiltrating cell level
| Data ID |
Disease |
Sample number |
Sample type |
|
GSE55851 (GEO) |
Adult T-cell leukemia |
21 |
Normal (3), Asymptomatic carriers (HTLV1+)(6), Adult T-cell Leukemia-lymphoma (HTLV1+)(12) |
|
GSE29312 (GEO) |
HTLV-1 associated myelopathy |
39 |
Normal (9), Asymptomatic carriers (HTLV1+)(20), HTLV-1-associated myelopathy (HTLV1+)(10) |
|
GSE29332 (GEO) |
HTLV-1 associated myelopathy |
35 |
Normal (8), Asymptomatic carriers (HTLV1+)(17), HTLV-1-associated myelopathy (HTLV1+)(10) |
> Dataset: GSE55851
|
|
HeatMap of cell type fractions in all samples
|
Lollipop of SMARCD3 expression and immune infiltrating cell level correlation result in HTLV1+ samples
|
SMARCD3 expression: Low -> High
|
|
|
> Dataset: GSE29312
|
|
HeatMap of cell type fractions in all samples
|
Lollipop of SMARCD3 expression and immune infiltrating cell level correlation result in HTLV1+ samples
|
SMARCD3 expression: Low -> High
|
|
|
> Dataset: GSE29332
|
|
HeatMap of cell type fractions in all samples
|
Lollipop of SMARCD3 expression and immune infiltrating cell level correlation result in HTLV1+ samples
|
SMARCD3 expression: Low -> High
|
|
|
|
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HTLV1 Target gene Detail Information