HBV Target gene Detail Information

> SMARCD1 Gene Search Result

Gene Information

Gene Name	SMARCD1
Gene ID	6602
Gene Full Name	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1
Gene Alias	Rsc6p; BAF60A; CRACD1
Transcripts	ENSG00000066117
Virus	HBV
Gene Type	protein coding
HPA Location Info	Nucleoplasm;Vesicles;
HPA Protein Class Info	Cancer-related genes, Predicted intracellular proteins
Uniport_ID	Q96GM5
HGNC ID	HGNC:11106
VEGA ID	OTTHUMG00000150194
OMIM ID	601735
String ID	9606.ENSP00000378414
PharmGKB ID	PA35956

Target gene [SMARCD1] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
1001028	chr12	120	816	184	1120	View
1008294	chr12	20	1		21	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
LIHC (TCGA)	Liver hepatocellular carcinoma	424	Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC
HeatMap of cell type fractions in all samples	Lollipop of SMARCD1 expression and immune infiltrating cell level correlation result in HBV+ samples
SMARCD1 expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).