HIV Target gene Detail Information

> SMARCC2 Gene Search Result

Gene Information

Gene Name	SMARCC2
Gene ID	6601
Gene Full Name	SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2
Gene Alias	Rsc8; BAF170; CRACC2
Transcripts	ENSG00000139613
Virus	HIV
Gene Type	protein coding
HPA Location Info	Nucleoplasm;
HPA Protein Class Info	Predicted intracellular proteins, Transcription factors
Uniport_ID	Q8TAQ2
HGNC ID	HGNC:11105
VEGA ID	OTTHUMG00000170288
OMIM ID	601734
String ID	9606.ENSP00000267064
PharmGKB ID	PA35955

Target gene [SMARCC2] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
4005816	chr12	26	3		29	View
4009807	chr12	7	3		10	View
4010031	chr12	10			10	View
4013148	chr12	4			4	View

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).