Gene Information
Gene Name
|
SMARCC1 |
Gene ID
|
6599
|
Gene Full Name
|
SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1 |
Gene Alias
|
Rsc8; SRG3; SWI3; BAF155; CRACC1 |
Transcripts
|
ENSG00000173473
|
Virus
|
HBV |
Gene Type
|
protein coding |
HPA Location Info
|
Nucleoplasm;
|
HPA Protein Class Info
|
Plasma proteins, Predicted intracellular proteins, Transcription factors |
Gene Function
|
Suppressor gene
|
Uniport_ID
|
Q92922
|
HGNC ID
|
HGNC:11104
|
VEGA ID
|
OTTHUMG00000133519
|
OMIM ID
|
601732 |
String ID
|
9606.ENSP00000254480
|
PharmGKB ID
|
PA35954
|
Target gene [SMARCC1] related to VISs
DVID |
Chromosome |
HM |
TFBS |
CA |
Sum of Overlapped Records |
Detail |
1006503 |
chr3 |
21 |
12 |
4 |
37 |
View |
1006905 |
chr3 |
21 |
11 |
|
32 |
View |
1401702 |
chr3 |
21 |
12 |
4 |
37 |
View |
1401703 |
chr3 |
21 |
11 |
|
32 |
View |
Relationship between gene expression and immune infiltrating cell level
Data ID |
Disease |
Sample number |
Sample type |
LIHC (TCGA) |
Liver hepatocellular carcinoma |
424 |
Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18) |
> Dataset: LIHC
|
HeatMap of cell type fractions in all samples
|
Lollipop of SMARCC1 expression and immune infiltrating cell level correlation result in HBV+ samples
|
SMARCC1 expression: Low -> High
|
|
|
|
|