HTLV1 Target gene Detail Information

> SMARCB1 Gene Search Result

Gene Information

Gene Name	SMARCB1
Gene ID	6598
Gene Full Name	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1
Gene Alias	RDT; CSS3; INI1; SNF5; Snr1; BAF47; MRD15; RTPS1; Sfh1p; hSNFS; SNF5L1; SWNTS1; PPP1R144
Transcripts	ENSG00000275837
Virus	HTLV1
Gene Type	protein coding
HPA Location Info	Nucleoplasm;Nucleoli fibrillar center;
HPA Protein Class Info	Cancer-related genes, Disease related genes, Plasma proteins, Predicted intracellular proteins
Gene Function	Suppressor gene
Uniport_ID	Q12824
HGNC ID	HGNC:11103
VEGA ID	OTTHUMG00000190063
OMIM ID	601607
String ID	9606.ENSP00000263121
PharmGKB ID	PA35953

Target gene [SMARCB1] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
6002650	chr22	10	207	4	221	View

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).