|
Gene Information
|
Gene Name
|
SMARCB1 |
|
Gene ID
|
6598
|
|
Gene Full Name
|
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1 |
|
Gene Alias
|
RDT; CSS3; INI1; SNF5; Snr1; BAF47; MRD15; RTPS1; Sfh1p; hSNFS; SNF5L1; SWNTS1; PPP1R144 |
|
Transcripts
|
ENSG00000275837
|
|
Virus
|
HBV |
|
Gene Type
|
protein coding |
|
HPA Location Info
|
Nucleoplasm;Nucleoli fibrillar center; 
|
|
HPA Protein Class Info
|
Cancer-related genes, Disease related genes, Plasma proteins, Predicted intracellular proteins |
|
Gene Function
|
Suppressor gene
|
|
Uniport_ID
|
Q12824
|
|
HGNC ID
|
HGNC:11103
|
|
VEGA ID
|
OTTHUMG00000190063
|
|
OMIM ID
|
601607 |
|
String ID
|
9606.ENSP00000263121
|
|
PharmGKB ID
|
PA35953
|
Target gene [SMARCB1] related to VISs 
| DVID |
Chromosome |
HM |
TFBS |
CA |
Sum of Overlapped Records |
Detail |
| 1013219 |
chr22 |
5 |
|
|
5 |
View |
Relationship between gene expression and immune infiltrating cell level
| Data ID |
Disease |
Sample number |
Sample type |
|
LIHC (TCGA) |
Liver hepatocellular carcinoma |
424 |
Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18) |
> Dataset: LIHC
|
|
HeatMap of cell type fractions in all samples
|
Lollipop of SMARCB1 expression and immune infiltrating cell level correlation result in HBV+ samples
|
SMARCB1 expression: Low -> High
|
|
|
|
|
HBV Target gene Detail Information