Gene Information
Gene Name
|
SMARCA5 |
Gene ID
|
8467
|
Gene Full Name
|
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 |
Gene Alias
|
ISWI; SNF2H; hISWI; hSNF2H; WCRF135 |
Transcripts
|
ENSG00000153147
|
Virus
|
HTLV1 |
Gene Type
|
protein coding |
HPA Location Info
|
Nucleoplasm;Nucleoli fibrillar center;
|
HPA Protein Class Info
|
Predicted intracellular proteins, Transcription factors |
Uniport_ID
|
O60264
|
HGNC ID
|
HGNC:11101
|
VEGA ID
|
OTTHUMG00000161474
|
OMIM ID
|
603375 |
String ID
|
9606.ENSP00000283131
|
Drugbank ID
|
BE0004581
|
PharmGKB ID
|
PA35951
|
Target gene [SMARCA5] related to VISs
DVID |
Chromosome |
HM |
TFBS |
CA |
Sum of Overlapped Records |
Detail |
6026807 |
chr4 |
2 |
|
|
2 |
View |
6100266 |
chr4 |
|
|
|
0 |
View |
6100267 |
chr4 |
1 |
9 |
|
10 |
View |
Relationship between gene expression and immune infiltrating cell level
Data ID |
Disease |
Sample number |
Sample type |
GSE55851 (GEO) |
Adult T-cell leukemia |
21 |
Normal (3), Asymptomatic carriers (HTLV1+)(6), Adult T-cell Leukemia-lymphoma (HTLV1+)(12) |
GSE29312 (GEO) |
HTLV-1 associated myelopathy |
39 |
Normal (9), Asymptomatic carriers (HTLV1+)(20), HTLV-1-associated myelopathy (HTLV1+)(10) |
GSE29332 (GEO) |
HTLV-1 associated myelopathy |
35 |
Normal (8), Asymptomatic carriers (HTLV1+)(17), HTLV-1-associated myelopathy (HTLV1+)(10) |
> Dataset: GSE55851
|
HeatMap of cell type fractions in all samples
|
Lollipop of SMARCA5 expression and immune infiltrating cell level correlation result in HTLV1+ samples
|
SMARCA5 expression: Low -> High
|
|
|
> Dataset: GSE29312
|
HeatMap of cell type fractions in all samples
|
Lollipop of SMARCA5 expression and immune infiltrating cell level correlation result in HTLV1+ samples
|
SMARCA5 expression: Low -> High
|
|
|
> Dataset: GSE29332
|
HeatMap of cell type fractions in all samples
|
Lollipop of SMARCA5 expression and immune infiltrating cell level correlation result in HTLV1+ samples
|
SMARCA5 expression: Low -> High
|
|
|
|
|