HIV Target gene Detail Information

> SMARCA4 Gene Search Result


Gene Information
Gene Name SMARCA4
Gene ID 6597
Gene Full Name SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4
Gene Alias BRG1; CSS4; SNF2; SWI2; MRD16; RTPS2; BAF190; SNF2L4; SNF2LB; hSNF2b; BAF190A
Transcripts ENSG00000127616
Virus HIV
Gene Type protein coding
HPA Location Info Nucleoplasm;
HPA Protein Class Info Cancer-related genes, Disease related genes, Plasma proteins, Predicted intracellular proteins
Gene Function Suppressor gene
Uniport_ID P51532
HGNC ID HGNC:11100
VEGA ID OTTHUMG00000169272
OMIM ID 603254
String ID 9606.ENSP00000395654
PharmGKB ID PA35950
Target gene [SMARCA4] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
4003565 chr19 52 6 1 59 View
4013459 chr19 2 1 3 View
4013886 chr19 3 3 View

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).