HIV Target gene Detail Information

> SLTM Gene Search Result

Gene Information

Gene Name	SLTM
Gene ID	79811
Gene Full Name	SAFB like transcription modulator
Gene Alias	Met
Transcripts	ENSG00000137776
Virus	HIV
Gene Type	protein coding
HPA Location Info	Nuclear bodies;Nucleoplasm;
HPA Protein Class Info	Predicted intracellular proteins
Uniport_ID	Q9NWH9
HGNC ID	HGNC:20709
VEGA ID	OTTHUMG00000074033
String ID	9606.ENSP00000369887
PharmGKB ID	PA142670898

Target gene [SLTM] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
4002219	chr15	91	10	4	105	View
4006328	chr15	2	18	5	25	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
GSE17372 (GEO)	AIDS-associated lymphoma	17	AIDS-Related Lymphomas (HIV+)(17)
GSE50834 (GEO)	HIV-infected disease	44	HIV infected (23), HIV/TB co-infected (21)

> Dataset: GSE17372
HeatMap of cell type fractions in all samples	Lollipop of SLTM expression and immune infiltrating cell level correlation result in HIV+ samples
SLTM expression: Low -> High

> Dataset: GSE50834
HeatMap of cell type fractions in all samples	Lollipop of SLTM expression and immune infiltrating cell level correlation result in HIV+ samples
SLTM expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).