HTLV1 Target gene Detail Information

> SLF1 Gene Search Result


Gene Information
Gene Name SLF1
Gene ID 84250
Gene Full Name SMC5-SMC6 complex localization factor 1
Gene Alias BRCTx; BRCTD1; ANKRD32
Transcripts ENSG00000133302
Virus HTLV1
Gene Type protein coding
HPA Location Info Nucleoplasm;
Membrane Info Predicted membrane proteins
HPA Protein Class Info Predicted intracellular proteins, Predicted membrane proteins
Uniport_ID Q9BQI6
HGNC ID HGNC:25408
VEGA ID OTTHUMG00000121133
OMIM ID 618467
PharmGKB ID PA134911523
Target gene [SLF1] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6012767 chr5 9 9 3 21 View
6031066 chr5 0 View

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).