HBV Target gene Detail Information

> SLCO5A1 Gene Search Result


Gene Information
Gene Name SLCO5A1
Gene ID 81796
Gene Full Name solute carrier organic anion transporter family member 5A1
Gene Alias OATPJ; OATP-J; OATP5A1; OATPRP4; OATP-RP4; SLC21A15
Transcripts ENSG00000137571
Virus HBV
Gene Type protein coding
HPA Location Info Plasma membrane;Vesicles;
Membrane Info Predicted membrane proteins
HPA Protein Class Info Predicted membrane proteins, Transporters
Uniport_ID Q9H2Y9
HGNC ID HGNC:19046
VEGA ID OTTHUMG00000165121
OMIM ID 613543
String ID 9606.ENSP00000260126
PharmGKB ID PA134948571
Target gene [SLCO5A1] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1000657 chr8 1020 317 334 1671 View
1002783 chr8 158 28 19 205 View
1002915 chr8 150 22 19 191 View
1003109 chr8 132 18 15 165 View
1003641 chr8 98 17 4 119 View
1403688 chr8 1020 317 334 1671 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
LIHC (TCGA) Liver hepatocellular carcinoma 424 Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC

HeatMap of cell type fractions in all samples Lollipop of SLCO5A1 expression and immune infiltrating cell level correlation result in HBV+ samples
SLCO5A1 expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).