HBV Target gene Detail Information

> SLCO2A1 Gene Search Result


Gene Information
Gene Name SLCO2A1
Gene ID 6578
Gene Full Name solute carrier organic anion transporter family member 2A1
Gene Alias PGT; MATR1; PHOAR2; OATP2A1; SLC21A2
Transcripts ENSG00000174640
Virus HBV
Gene Type protein coding
HPA Location Info
Membrane Info Predicted membrane proteins
HPA Protein Class Info Disease related genes, Potential drug targets, Predicted membrane proteins, Transporters
Uniport_ID Q92959
HGNC ID HGNC:10955
VEGA ID OTTHUMG00000159745
OMIM ID 601460
String ID 9606.ENSP00000311291
Drugbank ID BE0003655
PharmGKB ID PA35840
Target gene [SLCO2A1] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1400187 chr3 96 5 101 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
LIHC (TCGA) Liver hepatocellular carcinoma 424 Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC

HeatMap of cell type fractions in all samples Lollipop of SLCO2A1 expression and immune infiltrating cell level correlation result in HBV+ samples
SLCO2A1 expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).