HIV Target gene Detail Information

> SLC6A16 Gene Search Result


Gene Information
Gene Name SLC6A16
Gene ID 28968
Gene Full Name solute carrier family 6 member 16
Gene Alias NT5; NTT5
Transcripts ENSG00000063127
Virus HIV
Gene Type protein coding
HPA Location Info Golgi apparatus;
Membrane Info Predicted membrane proteins
HPA Protein Class Info Predicted intracellular proteins, Predicted membrane proteins, Transporters
Uniport_ID Q9GZN6
HGNC ID HGNC:13622
VEGA ID OTTHUMG00000183179
OMIM ID 607972
String ID 9606.ENSP00000338627
PharmGKB ID PA37800
Target gene [SLC6A16] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
4005564 chr19 28 3 31 View
4006375 chr19 25 25 View
4007453 chr19 19 19 View
4007671 chr19 5 13 18 View
4013650 chr19 3 3 View
4014276 chr19 1 1 2 View

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).