HBV Target gene Detail Information

> SLC5A7 Gene Search Result


Gene Information
Gene Name SLC5A7
Gene ID 60482
Gene Full Name solute carrier family 5 member 7
Gene Alias CHT; CHT1; CMS20; HMN7A
Transcripts ENSG00000115665
Virus HBV
Gene Type protein coding
HPA Location Info Cell Junctions;Intermediate filaments;Nuclear bodies;
Membrane Info Predicted membrane proteins
HPA Protein Class Info Disease related genes, Potential drug targets, Predicted membrane proteins, Transporters
Uniport_ID Q9GZV3
HGNC ID HGNC:14025
VEGA ID OTTHUMG00000130959
OMIM ID 608761
String ID 9606.ENSP00000264047
Drugbank ID BE0000696
PharmGKB ID PA37838
Target gene [SLC5A7] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1014687 chr2 3 3 View
1014688 chr2 3 3 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
LIHC (TCGA) Liver hepatocellular carcinoma 424 Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC

HeatMap of cell type fractions in all samples Lollipop of SLC5A7 expression and immune infiltrating cell level correlation result in HBV+ samples
SLC5A7 expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).