HBV Target gene Detail Information

> SLC4A8 Gene Search Result


Gene Information
Gene Name SLC4A8
Gene ID 9498
Gene Full Name solute carrier family 4 member 8
Gene Alias NBC3; NDCBE
Transcripts ENSG00000050438
Virus HBV
Gene Type protein coding
HPA Location Info Plasma membrane;
Membrane Info Predicted membrane proteins
HPA Protein Class Info Predicted membrane proteins
Uniport_ID Q2Y0W8
HGNC ID HGNC:11034
VEGA ID OTTHUMG00000169489
OMIM ID 605024
String ID 9606.ENSP00000405812
Drugbank ID BE0004680
PharmGKB ID PA35900
Target gene [SLC4A8] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1009634 chr12 11 3 1 15 View
1015456 chr12 2 2 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
LIHC (TCGA) Liver hepatocellular carcinoma 424 Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC

HeatMap of cell type fractions in all samples Lollipop of SLC4A8 expression and immune infiltrating cell level correlation result in HBV+ samples
SLC4A8 expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).