HBV Target gene Detail Information

> SLC39A9 Gene Search Result


Gene Information
Gene Name SLC39A9
Gene ID 55334
Gene Full Name solute carrier family 39 member 9
Gene Alias ZIP9; ZIP-9
Transcripts ENSG00000029364
Virus HBV
Gene Type protein coding
HPA Location Info Endoplasmic reticulum;
Membrane Info Predicted membrane proteins
HPA Protein Class Info Predicted membrane proteins, Transporters
Uniport_ID Q9NUM3
HGNC ID HGNC:20182
VEGA ID OTTHUMG00000171232
OMIM ID 619116
String ID 9606.ENSP00000336887
Drugbank ID BE0010242
PharmGKB ID PA134889179
Target gene [SLC39A9] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1014054 chr14 3 1 4 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
LIHC (TCGA) Liver hepatocellular carcinoma 424 Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC

HeatMap of cell type fractions in all samples Lollipop of SLC39A9 expression and immune infiltrating cell level correlation result in HBV+ samples
SLC39A9 expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).