HBV Target gene Detail Information

> SLC39A11 Gene Search Result


Gene Information
Gene Name SLC39A11
Gene ID 201266
Gene Full Name solute carrier family 39 member 11
Gene Alias ZIP11; ZIP-11; C17orf26
Transcripts ENSG00000282291
Virus HBV
Gene Type protein coding
HPA Location Info Nucleoplasm;
Membrane Info Predicted membrane proteins
HPA Protein Class Info Predicted intracellular proteins, Predicted membrane proteins, Transporters
Uniport_ID Q8N1S5
HGNC ID HGNC:14463
VEGA ID OTTHUMG00000191308
OMIM ID 616508
String ID 9606.ENSP00000445829
Drugbank ID BE0010245
PharmGKB ID PA25581
Target gene [SLC39A11] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1004999 chr17 51 12 1 64 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
LIHC (TCGA) Liver hepatocellular carcinoma 424 Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC

HeatMap of cell type fractions in all samples Lollipop of SLC39A11 expression and immune infiltrating cell level correlation result in HBV+ samples
SLC39A11 expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).