HIV Target gene Detail Information

> SLC38A10 Gene Search Result

Gene Information

Gene Name	SLC38A10
Gene ID	124565
Gene Full Name	solute carrier family 38 member 10
Gene Alias	PP1744
Transcripts	ENSG00000157637
Virus	HIV
Gene Type	protein coding
HPA Location Info	Golgi apparatus;
Membrane Info	Predicted membrane proteins
HPA Protein Class Info	Plasma proteins, Predicted intracellular proteins, Predicted membrane proteins, Transporters
Uniport_ID	Q9HBR0
HGNC ID	HGNC:28237
VEGA ID	OTTHUMG00000168049
OMIM ID	616525
String ID	9606.ENSP00000363891
PharmGKB ID	PA162403738

Target gene [SLC38A10] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
4014273	chr17	1	1		2	View
4300043	chr17	39	6	12	57	View
4300044	chr17	1			1	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
GSE17372 (GEO)	AIDS-associated lymphoma	17	AIDS-Related Lymphomas (HIV+)(17)
GSE50834 (GEO)	HIV-infected disease	44	HIV infected (23), HIV/TB co-infected (21)

> Dataset: GSE17372
HeatMap of cell type fractions in all samples	Lollipop of SLC38A10 expression and immune infiltrating cell level correlation result in HIV+ samples
SLC38A10 expression: Low -> High

> Dataset: GSE50834
HeatMap of cell type fractions in all samples	Lollipop of SLC38A10 expression and immune infiltrating cell level correlation result in HIV+ samples
SLC38A10 expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).