HBV Target gene Detail Information

> SLC32A1 Gene Search Result


Gene Information
Gene Name SLC32A1
Gene ID 140679
Gene Full Name solute carrier family 32 member 1
Gene Alias VGAT; VIAAT
Transcripts ENSG00000101438
Virus HBV
Gene Type protein coding
HPA Location Info
Membrane Info Predicted membrane proteins
HPA Protein Class Info Predicted membrane proteins, Transporters
Uniport_ID Q9H598
HGNC ID HGNC:11018
VEGA ID OTTHUMG00000032457
OMIM ID 616440
String ID 9606.ENSP00000217420
Drugbank ID BE0002308
PharmGKB ID PA401
Target gene [SLC32A1] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1003047 chr20 103 47 21 171 View
1006719 chr20 33 2 35 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
LIHC (TCGA) Liver hepatocellular carcinoma 424 Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC

HeatMap of cell type fractions in all samples Lollipop of SLC32A1 expression and immune infiltrating cell level correlation result in HBV+ samples
SLC32A1 expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).