HBV Target gene Detail Information

> SLC2A4 Gene Search Result


Gene Information
Gene Name SLC2A4
Gene ID 6517
Gene Full Name solute carrier family 2 member 4
Gene Alias GLUT4
Transcripts ENSG00000288174
Virus HBV
Gene Type protein coding
HPA Location Info
Membrane Info Predicted membrane proteins
HPA Protein Class Info Disease related genes, Potential drug targets, Predicted membrane proteins, Transporters
Uniport_ID P14672
HGNC ID HGNC:11009
VEGA ID OTTHUMG00000102181
OMIM ID 138190
String ID 9606.ENSP00000320935
Drugbank ID BE0000893
PharmGKB ID PA35879
Target gene [SLC2A4] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1404428 chr17 39 39 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
LIHC (TCGA) Liver hepatocellular carcinoma 424 Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC

HeatMap of cell type fractions in all samples Lollipop of SLC2A4 expression and immune infiltrating cell level correlation result in HBV+ samples
SLC2A4 expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).