HIV Target gene Detail Information

> SLC26A11 Gene Search Result


Gene Information
Gene Name SLC26A11
Gene ID 284129
Gene Full Name solute carrier family 26 member 11
Transcripts ENSG00000181045
Virus HIV
Gene Type protein coding
HPA Location Info Golgi apparatus;Vesicles;Nucleoplasm;
Membrane Info Predicted membrane proteins
HPA Protein Class Info Predicted intracellular proteins, Predicted membrane proteins, Transporters
Uniport_ID Q86WA9
HGNC ID HGNC:14471
VEGA ID OTTHUMG00000133419
OMIM ID 610117
String ID 9606.ENSP00000355384
PharmGKB ID PA37888
Target gene [SLC26A11] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
4001208 chr17 178 16 194 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
GSE17372 (GEO) AIDS-associated lymphoma 17 AIDS-Related Lymphomas (HIV+)(17)
GSE50834 (GEO) HIV-infected disease 44 HIV infected (23), HIV/TB co-infected (21)

> Dataset: GSE17372

HeatMap of cell type fractions in all samples Lollipop of SLC26A11 expression and immune infiltrating cell level correlation result in HIV+ samples
SLC26A11 expression: Low -> High

> Dataset: GSE50834

HeatMap of cell type fractions in all samples Lollipop of SLC26A11 expression and immune infiltrating cell level correlation result in HIV+ samples
SLC26A11 expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).