HBV Target gene Detail Information

> SLC25A20 Gene Search Result


Gene Information
Gene Name SLC25A20
Gene ID 788
Gene Full Name solute carrier family 25 member 20
Gene Alias CAC; CACT
Transcripts ENSG00000178537
Virus HBV
Gene Type protein coding
HPA Location Info Cytosol;Mitochondria;
Membrane Info Predicted membrane proteins
HPA Protein Class Info Disease related genes, Potential drug targets, Predicted intracellular proteins, Predicted membrane proteins, Transporters
Uniport_ID O43772
HGNC ID HGNC:1421
VEGA ID OTTHUMG00000133538
OMIM ID 613698
String ID 9606.ENSP00000326305
Drugbank ID BE0000579
PharmGKB ID PA35031
Target gene [SLC25A20] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1012340 chr3 6 1 7 View
1012603 chr3 5 1 6 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
LIHC (TCGA) Liver hepatocellular carcinoma 424 Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC

HeatMap of cell type fractions in all samples Lollipop of SLC25A20 expression and immune infiltrating cell level correlation result in HBV+ samples
SLC25A20 expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).