HIV Target gene Detail Information

> SLC19A1 Gene Search Result

Gene Information

Gene Name	SLC19A1
Gene ID	6573
Gene Full Name	solute carrier family 19 member 1
Gene Alias	RFC; CHMD; FOLT; IFC1; REFC; RFC1; IFC-1
Transcripts	ENSG00000173638
Virus	HIV
Gene Type	protein coding
HPA Location Info	Plasma membrane;
Membrane Info	Predicted membrane proteins
HPA Protein Class Info	Cancer-related genes, Predicted membrane proteins, Transporters
Uniport_ID	P41440
HGNC ID	HGNC:10937
VEGA ID	OTTHUMG00000090397
OMIM ID	600424
String ID	9606.ENSP00000308895
Drugbank ID	BE0004711
PharmGKB ID	PA327

Target gene [SLC19A1] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
4001923	chr21	117	6		123	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
GSE17372 (GEO)	AIDS-associated lymphoma	17	AIDS-Related Lymphomas (HIV+)(17)

> Dataset: GSE17372
HeatMap of cell type fractions in all samples	Lollipop of SLC19A1 expression and immune infiltrating cell level correlation result in HIV+ samples
SLC19A1 expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).