HBV Target gene Detail Information

> SLC16A4 Gene Search Result


Gene Information
Gene Name SLC16A4
Gene ID 9122
Gene Full Name solute carrier family 16 member 4
Gene Alias MCT4; MCT5
Transcripts ENSG00000168679
Virus HBV
Gene Type protein coding
HPA Location Info Cytosol;Microtubules;Cytokinetic bridge;
Membrane Info Predicted membrane proteins
HPA Protein Class Info Predicted membrane proteins
Uniport_ID O15374
HGNC ID HGNC:10925
VEGA ID OTTHUMG00000011285
OMIM ID 603878
String ID 9606.ENSP00000358794
Drugbank ID BE0000195
PharmGKB ID PA35816
Target gene [SLC16A4] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1013349 chr1 5 5 View
1014026 chr1 4 4 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
LIHC (TCGA) Liver hepatocellular carcinoma 424 Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC

HeatMap of cell type fractions in all samples Lollipop of SLC16A4 expression and immune infiltrating cell level correlation result in HBV+ samples
SLC16A4 expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).