HBV Target gene Detail Information

> SLC16A3 Gene Search Result


Gene Information
Gene Name SLC16A3
Gene ID 9123
Gene Full Name solute carrier family 16 member 3
Gene Alias MCT3; MCT4; MCT 3; MCT 4; MCT-3; MCT-4
Transcripts ENSG00000141526
Virus HBV
Gene Type protein coding
HPA Location Info Plasma membrane;Nuclear membrane;
Membrane Info Predicted membrane proteins
HPA Protein Class Info Predicted membrane proteins, Transporters
Uniport_ID O15427
HGNC ID HGNC:10924
VEGA ID OTTHUMG00000178832
OMIM ID 603877
String ID 9606.ENSP00000463978
Drugbank ID BE0000449
PharmGKB ID PA35815
Target gene [SLC16A3] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1100102 chr17 111 85 68 264 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
LIHC (TCGA) Liver hepatocellular carcinoma 424 Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC

HeatMap of cell type fractions in all samples Lollipop of SLC16A3 expression and immune infiltrating cell level correlation result in HBV+ samples
SLC16A3 expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).