HBV Target gene Detail Information

> SLC13A5 Gene Search Result


Gene Information
Gene Name SLC13A5
Gene ID 284111
Gene Full Name solute carrier family 13 member 5
Gene Alias INDY; NACT; mIndy; EIEE25
Transcripts ENSG00000141485
Virus HBV
Gene Type protein coding
HPA Location Info Plasma membrane;Cytosol;Nucleoplasm;
Membrane Info Predicted membrane proteins
HPA Protein Class Info Disease related genes, Potential drug targets, Predicted membrane proteins, Transporters
Uniport_ID Q86YT5
HGNC ID HGNC:23089
VEGA ID OTTHUMG00000102052
OMIM ID 608305
String ID 9606.ENSP00000406220
Drugbank ID BE0008804
PharmGKB ID PA134950956
Target gene [SLC13A5] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1005957 chr17 32 10 2 44 View
1006375 chr17 28 8 2 38 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
LIHC (TCGA) Liver hepatocellular carcinoma 424 Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC

HeatMap of cell type fractions in all samples Lollipop of SLC13A5 expression and immune infiltrating cell level correlation result in HBV+ samples
SLC13A5 expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).