HBV Target gene Detail Information

> SLC12A7 Gene Search Result


Gene Information
Gene Name SLC12A7
Gene ID 10723
Gene Full Name solute carrier family 12 member 7
Gene Alias KCC4
Transcripts ENSG00000276482
Virus HBV
Gene Type protein coding
HPA Location Info Cytosol;
Membrane Info Predicted membrane proteins
HPA Protein Class Info Plasma proteins, Predicted membrane proteins, Transporters
Uniport_ID Q9Y666
HGNC ID HGNC:10915
VEGA ID OTTHUMG00000190154
OMIM ID 604879
String ID 9606.ENSP00000264930
Drugbank ID BE0000276
PharmGKB ID PA35809
Target gene [SLC12A7] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1009692 chr5 10 4 1 15 View
1010602 chr5 11 11 View
1010927 chr5 10 10 View
1402381 chr5 10 10 View
1403112 chr5 11 11 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
LIHC (TCGA) Liver hepatocellular carcinoma 424 Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC

HeatMap of cell type fractions in all samples Lollipop of SLC12A7 expression and immune infiltrating cell level correlation result in HBV+ samples
SLC12A7 expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).