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HBV Target gene Detail Information

> SLBP Gene Search Result


Gene Information
Gene Name SLBP
Gene ID 7884
Gene Full Name stem-loop binding protein
Gene Alias HBP
Transcripts ENSG00000163950
Virus HBV
Gene Type protein coding
HPA Location Info Nucleoplasm;Cytosol;Nucleoli;
HPA Protein Class Info Predicted intracellular proteins
Uniport_ID Q14493
HGNC ID HGNC:10904
VEGA ID OTTHUMG00000089349
OMIM ID 602422
String ID 9606.ENSP00000417686
PharmGKB ID PA35804
Target gene [SLBP] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1011612 chr4 5 3 8 View
1011616 chr4 5 3 8 View
1011667 chr4 5 3 8 View
1011678 chr4 5 3 8 View
1012006 chr4 5 3 8 View
1012083 chr4 5 2 7 View
1012084 chr4 5 2 7 View
1012086 chr4 5 2 7 View
1012100 chr4 5 2 7 View
1012101 chr4 5 2 7 View
1012138 chr4 5 2 7 View
1012141 chr4 5 2 7 View
1012375 chr4 5 2 7 View
1402100 chr4 5 2 7 View
1402101 chr4 5 2 7 View
1402950 chr4 5 3 8 View
1402951 chr4 5 2 7 View
1403053 chr4 5 2 7 View
1403189 chr4 5 2 7 View
1403190 chr4 5 3 8 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
GSE114783 (GEO) Chronic HBV (CHB) infection 36 Chronic hepatitis B patients (HBV+)(10),Hepatocellular carcinoma (HBV+)(10),Liver cirrhosis(HBV+)(10),Normal(3),HBV carriers (3)
GSE114783 (GEO) Hepatocellular carcinoma 36 Chronic hepatitis B patients (HBV+)(10),Hepatocellular carcinoma (HBV+)(10),Liver cirrhosis(HBV+)(10),Normal(3),HBV carriers (3)
GSE114783 (GEO) Liver cirrhosis 36 Chronic hepatitis B patients (HBV+)(10),Hepatocellular carcinoma (HBV+)(10),Liver cirrhosis(HBV+)(10),Normal(3),HBV carriers (3)
LIHC (TCGA) Liver hepatocellular carcinoma 424 Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: GSE114783

HeatMap of cell type fractions in all samples Lollipop of SLBP expression and immune infiltrating cell level correlation result in HBV+ Chronic HBV (CHB) infection samples
SLBP expression: Low -> High
Lollipop of SLBP expression and immune infiltrating cell level correlation result in HBV+ Liver cirrhosis samples Lollipop of SLBP expression and immune infiltrating cell level correlation result in HBV+ Hepatocellular carcinoma samples

> Dataset: LIHC

HeatMap of cell type fractions in all samples Lollipop of SLBP expression and immune infiltrating cell level correlation result in HBV+ samples
SLBP expression: Low -> High
Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).