HIV Target gene Detail Information

> SLAMF6 Gene Search Result

Gene Information

Gene Name	SLAMF6
Gene ID	114836
Gene Full Name	SLAM family member 6
Gene Alias	KALI; NTBA; CD352; KALIb; Ly108; NTB-A; SF2000
Transcripts	ENSG00000162739
Virus	HIV
Gene Type	protein coding
HPA Location Info	Cytosol;Plasma membrane;
Membrane Info	Predicted membrane proteins
HPA Protein Class Info	CD markers, Predicted membrane proteins
Uniport_ID	Q96DU3
HGNC ID	HGNC:21392
VEGA ID	OTTHUMG00000022729
OMIM ID	606446
String ID	9606.ENSP00000357036
PharmGKB ID	PA134959277

Target gene [SLAMF6] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
4012678	chr1	2	1	1	4	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
GSE17372 (GEO)	AIDS-associated lymphoma	17	AIDS-Related Lymphomas (HIV+)(17)
GSE50834 (GEO)	HIV-infected disease	44	HIV infected (23), HIV/TB co-infected (21)

> Dataset: GSE17372
HeatMap of cell type fractions in all samples	Lollipop of SLAMF6 expression and immune infiltrating cell level correlation result in HIV+ samples
SLAMF6 expression: Low -> High

> Dataset: GSE50834
HeatMap of cell type fractions in all samples	Lollipop of SLAMF6 expression and immune infiltrating cell level correlation result in HIV+ samples
SLAMF6 expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).