HIV Target gene Detail Information

> SIN3A Gene Search Result


Gene Information
Gene Name SIN3A
Gene ID 25942
Gene Full Name SIN3 transcription regulator family member A
Gene Alias WITKOS
Transcripts ENSG00000169375
Virus HIV
Gene Type protein coding
HPA Location Info Nucleoplasm;
HPA Protein Class Info Cancer-related genes, Plasma proteins, Predicted intracellular proteins
Uniport_ID Q96ST3
HGNC ID HGNC:19353
VEGA ID OTTHUMG00000142834
OMIM ID 607776
String ID 9606.ENSP00000378402
PharmGKB ID PA134993567
Target gene [SIN3A] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
4000838 chr15 167 96 5 268 View
4002334 chr15 63 13 23 99 View
4006116 chr15 25 2 27 View
4009715 chr15 10 1 11 View
4012458 chr15 4 1 5 View

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).