HIV Target gene Detail Information

> SHOX2 Gene Search Result

Gene Information

Gene Name	SHOX2
Gene ID	6474
Gene Full Name	short stature homeobox 2
Gene Alias	OG12; SHOT; OG12X
Transcripts	ENSG00000168779
Virus	HIV
Gene Type	protein coding
HPA Location Info
HPA Protein Class Info	Predicted intracellular proteins, Transcription factors
Uniport_ID	O60902
HGNC ID	HGNC:10854
VEGA ID	OTTHUMG00000158755
OMIM ID	602504
String ID	9606.ENSP00000374240
PharmGKB ID	PA35756

Target gene [SHOX2] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
4014466	chr3	2			2	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
GSE17372 (GEO)	AIDS-associated lymphoma	17	AIDS-Related Lymphomas (HIV+)(17)

> Dataset: GSE17372
HeatMap of cell type fractions in all samples	Lollipop of SHOX2 expression and immune infiltrating cell level correlation result in HIV+ samples
SHOX2 expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).