HIV Target gene Detail Information

> SHOC2 Gene Search Result


Gene Information
Gene Name SHOC2
Gene ID 8036
Gene Full Name SHOC2, leucine rich repeat scaffold protein
Gene Alias SOC2; SUR8; SIAA0862
Transcripts ENSG00000108061
Virus HIV
Gene Type protein coding
HPA Location Info Cytosol;Nucleoplasm;
HPA Protein Class Info Disease related genes, Plasma proteins, Predicted intracellular proteins, RAS pathway related proteins
Uniport_ID Q9UQ13
HGNC ID HGNC:15454
VEGA ID OTTHUMG00000019047
OMIM ID 602775
String ID 9606.ENSP00000358464
PharmGKB ID PA37960
Target gene [SHOC2] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
4003165 chr10 50 19 69 View
4007490 chr10 10 6 3 19 View
4011972 chr10 4 2 6 View
4012561 chr10 2 3 5 View
4014841 chr10 2 2 View
4016479 chr10 0 View

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).