HBV Target gene Detail Information

> SHISA9 Gene Search Result

Gene Information

Gene Name	SHISA9
Gene ID	729993
Gene Full Name	shisa family member 9
Gene Alias	CKAMP44
Transcripts	ENSG00000237515
Virus	HBV
Gene Type	protein coding
HPA Location Info	Cytosol;Vesicles;
Membrane Info	Predicted membrane proteins
HPA Protein Class Info	Predicted membrane proteins, Transporters
Uniport_ID	B4DS77
HGNC ID	HGNC:37231
VEGA ID	OTTHUMG00000154258
OMIM ID	613346
String ID	9606.ENSP00000454014
PharmGKB ID	PA165450677

Target gene [SHISA9] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
1003903	chr16	45	10	47	102	View
1006288	chr16	1	39		40	View
1012948	chr16	2	1	3	6	View
1401754	chr16	1	39		40	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
LIHC (TCGA)	Liver hepatocellular carcinoma	424	Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC
HeatMap of cell type fractions in all samples	Lollipop of SHISA9 expression and immune infiltrating cell level correlation result in HBV+ samples
SHISA9 expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).